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  • Scientific Workflow Automation Technologies Laboratory

    Expertise: <ul> <li>Scientific workflow systems</li> <li>Data provenance in e-Science</li> <li>Generic composition of Web and Grid Services</li> <li>Ontology-based semantic mediation for scientific data</li> <li>Conceptual querying of XML</li> </ul>

    Current projects: <ul> <li><a href="http://kepler-project.org">Kepler</a></li> <li><a href="https://kepler-project.org/users/projects-using-kepler-1/kepler-core">Kepler/CORE</a></li> <li><a href="https://sdm.lbl.gov/sdmcenter/">SDM</a></li> <li><a href="http://reap.ecoinformatics.org/">REAP</a></li> <li><a href="http://camera.calit2.net/">CAMERA</a></li> <li><a href="http://www.ucgrid.org/">UCGrid</a></li> </ul>

    Team members: <ul> <li><b><a href="http://users.sdsc.edu/~altintas">Ilkay Altintas</a></b>, Director</li> <li><b><a href="http://users.sdsc.edu/~jianwu">Jianwu Wang, PhD</a></b>, Assistant Project Scientist </li> <li><b>Daniel Crawl, PhD</b>, Workflow Specialist </li> <li><b>Madhusudan Gujral, PhD</b>, Workflow Specialist </li> <li><b>Manish Anand, PhD</b>, Workflow Specialist </li> <li><b>Christopher Kuttruff</b>, Undergraduate Workflow and Web Development Specialist</li> </ul> <br /> <hr /> <h4>Recent Publications</h4> <ul> <li>Jianwu Wang, Prakashan Korambath, Seonah Kim, Scott Johnson, Kejian Jin, Daniel Crawl, Ilkay Altintas, Shava Smallen, Bill Labate, Kendall N. Houk. Theoretical Enzyme Design Using the Kepler Scientific Workflows on the Grid. Accepted by 5th Workshop on Computational Chemistry and Its Applications (5th CCA) at International Conference on Computational Science (ICCS 2010).</li> <li>Antoon Goderis, Christopher Brooks, Ilkay Altintas, Edward A. Lee, Carole A. Goble: Heterogeneous composition of models of computation. Future Generation Comp. Syst. 25(5): 552-560 (2009)</li> <li>Jianwu Wang, Daniel Crawl, Ilkay Altintas. Kepler + Hadoop – A General Architecture Facilitating Data-Intensive Applications in Scientific Workflow Systems. In Proceedings of the 4th Workshop on Workflows in Support of Large-Scale Science (WORKS09) at Supercomputing 2009 (SC2009) Conference. ACM 2009, ISBN 978-1-60558-717-2.</li> <li>Jianwu Wang, Ilkay Altintas, Parviez R. Hosseini, Derik Barseghian, Daniel Crawl, Chad Berkley, Matthew B. Jones. Accelerating Parameter Sweep Workflows by Utilizing Ad-hoc Network Computing Resources: an Ecological Example. In Proceedings of IEEE 2009 Third International Workshop on Scientific Workflows (SWF 2009), 2009 Congress on Services (Services 2009), pages 267-274.</li> <li>Daniel Crawl, Ilkay Altintas: A Provenance-Based Fault Tolerance Mechanism for Scientific Workflows. IPAW 2008: 152-159 </li> <li>Jianwu Wang, Ilkay Altintas, Chad Berkley, Lucas Gilbert, Matt B. Jones. A High-Level Distributed Execution Framework for Scientific Workflows. In Proceedings of workshop SWBES08: Challenging Issues in Workflow Applications, 4th IEEE International Conference on e-Science (e-Science 2008), pages 634-639.</li> <li>David Abramson, Colin Enticott, Ilkay Altintas: Nimrod/K: towards massively parallel dynamic grid workflows. SC 2008: 24</li> <li>Bertram Ludäscher, Norbert Podhorszki, Ilkay Altintas, Shawn Bowers, Timothy M. McPhillips: From computation models to models of provenance: the RWS approach. Concurrency and Computation: Practice and Experience 20(5): 507-518 (2008)</li> </ul>

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